BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB004H05SP1|AL425295
(890 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1751 1568 0.0
>3x_Contig1751
Length = 24682
Score = 1568 bits (767), Expect = 0.0
Identities = 842/891 (94%), Gaps = 2/891 (0%)
Strand = Plus / Plus
Query: 1 aaaattagattvtgtactaactgatgagtacaagaaacctaaacttgagcttactcctgc 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19092 aaaattagattctgtactaactgatgagtacaagaaacctaaacttgagcttactcctgc 19151
Query: 61 tactttaaaaggatraaaacggaagataaavaaaamaacatctatacttsatttatttga 120
|||||||||||||| ||||||||||||||| |||| ||||||||||||| ||||||||||
Sbjct: 19152 tactttaaaaggatcaaaacggaagataaacaaaacaacatctatacttcatttatttga 19211
Query: 121 atsattgssttctcctaagaacgattttgaaattgtattggatgatttagatgaagaaat 180
|| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19212 atcattgccttctcctaagaacgattttgaaattgtattggatgatttagatgaagaaat 19271
Query: 181 ggaatcsactgatgcttttaatastgaaagttcgtatgtkaatggtaaatatcccctaga 240
|||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 19272 ggaatccactgatgcttttaatactgaaagttcgtatgttaatggtaaatatcccctaga 19331
Query: 241 agccttaatatcttccacggaacatcaatcggaaaamaaggsaatggaaataatggaata 300
|||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 19332 agccttaatatcttccacggaacatcaatcggaaaacaaggcaatggaaataatggaata 19391
Query: 301 catamcgacagtattccaaataaaaamagaattacaggtacccagtccgatagtagatss 360
|||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 19392 cataccgacagtattccaaataaaaacagaattacaggtacccagtccgatagtagatcc 19451
Query: 361 aaagaatgaaattgascgtgaattgaatsgtataatctcagcaaaggagaatggtaamcc 420
||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| ||
Sbjct: 19452 aaagaatgaaattgaccgtgaattgaatcgtataatctcagcaaaggagaatggtaaccc 19511
Query: 421 catttavaattccacggaagtaaacaattacttagaagagatsattaattctgcatccac 480
|||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 19512 catttacaattccacggaagtaaacaattacttagaagagatcattaattctgcatccac 19571
Query: 481 caccgaagtgsccagsactgtsttamatcccaagttggaaamtagsttaaaaactataas 540
|||||||||| |||| ||||| ||| ||||||||||||||| ||| |||||||||||||
Sbjct: 19572 caccgaagtgcccagcactgtcttacatcccaagttggaaactagcttaaaaactataac 19631
Query: 541 accggstac-gaggacgaactgstcgggatggaacgaaaagtgsatgaactgggaacagc 599
||||| ||| ||| |||||||| |||| ||||||||||||||| |||||||| |||||||
Sbjct: 19632 accggctacggagcacgaactgctcggcatggaacgaaaagtgcatgaactgcgaacagc 19691
Query: 600 ggttgaggattscgtgaagtstsasagagaggctgtttgasaactttsacaagattttga 659
| ||||||||| ||| |||| | | ||||||||||||| | |||||| ||||||||||||
Sbjct: 19692 gcttgaggattccgtcaagtctcacagagaggctgtttcacaactttcacaagattttga 19751
Query: 660 agaaaaactacatccgacagtgtcaggcttagcataccaatactacactgactacatgaa 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19752 agaaaaactacatccgacagtgtcaggcttagcataccaatactacactgactacatgaa 19811
Query: 720 gtacaggaacgaccataagamtatgcmagaagagacacaatctcttgcggaacagatcaa 779
|||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 19812 gtacaggaacgaccataagactatgcaagaagagacacaatctcttgcggaacagatcaa 19871
Query: 780 acttgcccagcgtagtcaaatgattacccggacccttctttttgagtcttccttccataa 839
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19872 acttgcccagcgtagtc-aatgattacccggacccttctttttgagtcttccttccataa 19930
Query: 840 tcatgaaattttcaaattatgaamttaaagatgaaaagatttacgaaattg 890
||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 19931 tcatgaaattttcaaattatgaacttaaagatgaaaagatttacgaaattg 19981
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.42 0.717 1.34
Gapped
Lambda K H
1.42 0.717 1.34
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4730
Number of Sequences: 1807
Number of extensions: 4730
Number of successful extensions: 105
Number of sequences better than 1.0e-20: 1
length of query: 890
length of database: 10,358,551
effective HSP length: 16
effective length of query: 874
effective length of database: 10,329,639
effective search space: 9028104486
effective search space used: 9028104486
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.6 bits)
S1: 11 (23.0 bits)
S2: 49 (100.7 bits)